PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM75901.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

C2H2

Protein Properties

Length: 470aa MW: 52748.9 Da PI: 7.4154

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM75901.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	11.7	0.00078	404	426	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++Cp+C ++F++ L H r+H OWM75901.1 404 HECPICFRVFKSGQALGGHKRSH 426 79******************999 PP

Sequence ? help Back to Top
Protein Sequence Length: 470 aa Download sequence
MATTTKFVCK FCNKRYPCGK SLGGHLRSHR FGTNLSEDDC SRASGSSDHE KRELGPEVGG 60 SSGYGLRTNP KKTRRFRDSS SVAFHQQGYS NVCKECGKGF QSMKALCGHM ACHSEREKTS 120 DCFEEEEDDD DDDEEGEEEE DVTDQTGYQS KQFKPVVESD QSNGYSSVSE IEQEQEELAR 180 CLMMLSRDDR SRRIPNSSVS LVLESKSSPI RVRVRAVEGL NSAGHNEIME TKKQQGRDCK 240 LKSAEILLGS DKSDSGYMMY EEQNSDSSID ERIKIKELAK PKRVRDMTDF THLGKKLDKK 300 IDYMAAGKRI RNDSESPKDG PSCAGGIDFA LIASKQNHQC NVCYKLFDSR KALSGHRSAS 360 SCYRKVEPLP PSESNMDVNR QWTSKKLSSD LKKKLVGTKK SYRHECPICF RVFKSGQALG 420 GHKRSHFLGS SEERSMAIHQ DINKVQGLID LNLPAPLEED GNEDCRFVLC

Sequence ? help Back to Top

Protein Sequence Length: 470 aa Download sequence

MATTTKFVCK FCNKRYPCGK SLGGHLRSHR FGTNLSEDDC SRASGSSDHE KRELGPEVGG  60
SSGYGLRTNP KKTRRFRDSS SVAFHQQGYS NVCKECGKGF QSMKALCGHM ACHSEREKTS  120
DCFEEEEDDD DDDEEGEEEE DVTDQTGYQS KQFKPVVESD QSNGYSSVSE IEQEQEELAR  180
CLMMLSRDDR SRRIPNSSVS LVLESKSSPI RVRVRAVEGL NSAGHNEIME TKKQQGRDCK  240
LKSAEILLGS DKSDSGYMMY EEQNSDSSID ERIKIKELAK PKRVRDMTDF THLGKKLDKK  300
IDYMAAGKRI RNDSESPKDG PSCAGGIDFA LIASKQNHQC NVCYKLFDSR KALSGHRSAS  360
SCYRKVEPLP PSESNMDVNR QWTSKKLSSD LKKKLVGTKK SYRHECPICF RVFKSGQALG  420
GHKRSHFLGS SEERSMAIHQ DINKVQGLID LNLPAPLEED GNEDCRFVLC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G26610.1	2e-54	C2H2 family protein