PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM75943.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family ZF-HD
Protein Properties Length: 233aa    MW: 25915.2 Da    PI: 8.7542
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM75943.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer84.21.5e-264196556
  ZF-HD_dimer  5 rYkeClkNhAaslGghavDGCgEfmpsegee.gt...aaalkCaACgCHRnFHRre 56
                  Y+eC+kNhAa+lG  a+DGC+Efmps++++ g    +  l CaACgCHRnFHRr+
   OWM75943.1 41 GYRECRKNHAARLGRLALDGCREFMPSTSTSaGMtnvPGFLICAACGCHRNFHRRD 96
                 6*************************9777644355567799*************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 233 aa     Download sequence    
MDSPHNKAEI KCPATTDHSS ILHLGLHQAV PEPPQPAAMS GYRECRKNHA ARLGRLALDG  60
CREFMPSTST SAGMTNVPGF LICAACGCHR NFHRRDYWAS PGLAQGPSSP RPLSPVPTSY  120
YAPAPWMLQA PGSSRVPEPV TMISSPDGDE EDDRRSSRME ERKKRGRTKF SKEQKEKMEA  180
FAEKAGWKMK SSCEDDDGDE NNKAVEEFCR EVGVSRGVLK IWMNNHKRRK ASS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1162190RKKRGRTKFSKEQKEKMEAFAEKAGWKMK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69600.13e-44ZF-HD family protein