PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM75944.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

NAC

Protein Properties

Length: 393aa MW: 44470.8 Da PI: 6.8351

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM75944.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	168.5	2.2e-52	5	132	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kge 98 + pGfrFhPtdeelv +yLk+k+++++l++ e ik++diyk++PwdLpk ++++ekewyf+++rd+ky+++ r+nr+t +g+Wkatg+d++++s+ +++ OWM75944.1 5 MLPGFRFHPTDEELVGFYLKRKIQQRPLSI-ELIKQLDIYKYDPWDLPKLASTGEKEWYFYCPRDRKYRNSARPNRVTGAGFWKATGTDRPIYSSeGTK 102 579*************************.89***********9888999***********************************95666 PP NAM 99 lvglkktLvfykgrapkgektdWvmheyrl 128 +glkk+Lvfy+gra kg+kt+W+mhe+rl OWM75944.1 103 CIGLKKSLVFYRGRAAKGVKTEWMMHEFRL 132 7*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 393 aa Download sequence
MEEVMLPGFR FHPTDEELVG FYLKRKIQQR PLSIELIKQL DIYKYDPWDL PKLASTGEKE 60 WYFYCPRDRK YRNSARPNRV TGAGFWKATG TDRPIYSSEG TKCIGLKKSL VFYRGRAAKG 120 VKTEWMMHEF RLPSLVDPTS QNTFADKTIP AHDSWAICRI FKKTNSTAHQ RANFSQHHHH 180 QQSNLSPVST ETNISSESLN PPKTPLTPQV VPSQHQNNVP FILTNIRQVE SSPPTDMCSS 240 LEFATSYNTL SSTLTPGLIN NGLDNFLISP LQTLSEMSST NKSSLVDFSS ILFNMSCSDF 300 GDIGRVCEGL DVYGGSQHHH GQFNNEELYH VQSDLQSGLM KGPQEEEQWD RSVGLSYGVT 360 NLNGEDAWRS NLVGWDMGEL STLFSTNTTK CYT

Sequence ? help Back to Top

Protein Sequence Length: 393 aa Download sequence

MEEVMLPGFR FHPTDEELVG FYLKRKIQQR PLSIELIKQL DIYKYDPWDL PKLASTGEKE  60
WYFYCPRDRK YRNSARPNRV TGAGFWKATG TDRPIYSSEG TKCIGLKKSL VFYRGRAAKG  120
VKTEWMMHEF RLPSLVDPTS QNTFADKTIP AHDSWAICRI FKKTNSTAHQ RANFSQHHHH  180
QQSNLSPVST ETNISSESLN PPKTPLTPQV VPSQHQNNVP FILTNIRQVE SSPPTDMCSS  240
LEFATSYNTL SSTLTPGLIN NGLDNFLISP LQTLSEMSST NKSSLVDFSS ILFNMSCSDF  300
GDIGRVCEGL DVYGGSQHHH GQFNNEELYH VQSDLQSGLM KGPQEEEQWD RSVGLSYGVT  360
NLNGEDAWRS NLVGWDMGEL STLFSTNTTK CYT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G26870.1	6e-98	NAC family protein