PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM75956.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family bHLH
Protein Properties Length: 98aa    MW: 11087.4 Da    PI: 7.7342
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM75956.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH23.87.9e-0825641554
                HHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH 15 riNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                +i +  ++L+ l+P++ + ps K+s + +L++ ++YI+sL
  OWM75956.1 25 QISDLVSKLQHLVPELRRRPSDKVSASKVLQEICNYIRSL 64
                799999*********88*********************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 98 aa     Download sequence    
MSSRRSSRSR HSNDVSNNMS ITDHQISDLV SKLQHLVPEL RRRPSDKVSA SKVLQEICNY  60
IRSLHQEVDG LSHQLAQLLG SDDTDSDQAA IIRSLLMY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G26945.19e-36bHLH family protein