PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM75957.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family HD-ZIP
Protein Properties Length: 242aa    MW: 27109.2 Da    PI: 5.8473
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM75957.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox56.54.8e-183184356
                --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
    Homeobox  3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
                k+++++ eq+++Le+ Fe  +++  e++ +LA+ lgL+ rq+ +WFqNrRa++k
  OWM75957.1 31 KKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQIAIWFQNRRARWK 84
                456899***********************************************9 PP
2HD-ZIP_I/II129.81.1e-4130122193
  HD-ZIP_I/II   1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 
                  ekkrrl+ eqvk+LE++Fe  +kLeperK++lar+Lglqprq+a+WFqnrRAR+ktkqlEkdy+ Lkr+++a+k++ne+L++++++L++e+++
   OWM75957.1  30 EKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQIAIWFQNRRARWKTKQLEKDYDLLKRQFEAVKADNEALQAQNQKLQAEIQA 122
                  69***************************************************************************************9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 242 aa     Download sequence    
MSFSGVEVSA EEVPNAGEDE LSDDGSQAGE KKRRLNMEQV KTLEKNFELG NKLEPERKMQ  60
LARALGLQPR QIAIWFQNRR ARWKTKQLEK DYDLLKRQFE AVKADNEALQ AQNQKLQAEI  120
QALKSREPAE SINLNKETEG SSSNRSENSS EFKLDVSTRT PRTIDSPPLA APPPPPHPIT  180
SRQLFPTSSS LRSVNGGGGG IAHQLLHSSS SSSRPDLMVK EETFTNMFCG IDDQSGYWPW  240
LE
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
17987RRARWKTKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69780.13e-83HD-ZIP family protein