PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM75969.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family Whirly
Protein Properties Length: 268aa    MW: 29669.5 Da    PI: 9.4879
Description Whirly family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM75969.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Whirly215.26.1e-67912291139
      Whirly   1 svyktkaalkvkavrptfealdsgnlklkraGglllelanataerkydWekkqsfalsatevaelvdlaskesceffhdpaakgsneGkvrkalkvePl 99 
                 s+yk+kaal+v++++p+f++l+sg+ kl+r+G++ll++a+a+++r+ydW++kq+f+ls+te+a+++ l++++sceffhdp++++s+eGkvrk+lkvePl
  OWM75969.1  91 SIYKGKAALTVEPRAPDFTSLESGAYKLSREGFVLLQFAPAAGVRTYDWSRKQVFSLSVTEIATVIGLGARDSCEFFHDPFKGKSDEGKVRKVLKVEPL 189
                 7************************************************************************************************** PP

      Whirly 100 pdGsGlfvnlsvtnslvkgnesfsvPvskaefavlrsllv 139
                 pdGsG+f+nlsv+n++v+++es+++Pv+kae +vl s+++
  OWM75969.1 190 PDGSGHFFNLSVQNKMVNVDESIYIPVTKAELTVLVSAFN 229
                 ***********************************99986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 268 aa     Download sequence    
MFQLQSLCTI PSQNPRLCFH RSLISRQPLG CDRSTTGGAS RVPVSRSSNR NLSLKCRQSE  60
YYEQQQRYGA AVNSSTGGAG TSPPKVFVGH SIYKGKAALT VEPRAPDFTS LESGAYKLSR  120
EGFVLLQFAP AAGVRTYDWS RKQVFSLSVT EIATVIGLGA RDSCEFFHDP FKGKSDEGKV  180
RKVLKVEPLP DGSGHFFNLS VQNKMVNVDE SIYIPVTKAE LTVLVSAFNF ILPYLLGWHA  240
YADTVRPDDA QRTNNANPRY GGDFEWSR