PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM76009.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family MYB_related
Protein Properties Length: 310aa    MW: 33571.8 Da    PI: 10.2959
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM76009.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding43.57.4e-1496140347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE+ l++ + ++ G+g+W+ I+r + k+Rt+ q+ s+ qky
       OWM76009.1  96 PWTEEEHRLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKY 140
                      8*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 310 aa     Download sequence    
MSRTCSQCGN NGHNSRTCPE GGGPNMEVEA AEESGIMLFG VRLTDGAASF RKSASMNNLS  60
QYDQAQPQDS NVDAGYASDD VVHPSGRCRE RKRGVPWTEE EHRLFLLGLQ KVGKGDWRGI  120
SRNFVKTRTP TQVASHAQKY FLRRSNQNRR RRRSSLFDIT TDSFMGSSME EAKVHRETLA  180
LPQPAPNPGR ISLSSTFPVA LNPVFLPMNP EKQAEQLGTS KLERPSKPIR PIPILPVPPS  240
SRMAALNLSK TSLTAAMVID PLPLSLKLSA PSSSSSSPAS STEQKAQSPS AAPHSSSTFP  300
ASSDNIISVA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G70000.21e-79MYB_related family protein