PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM76021.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family C2H2
Protein Properties Length: 260aa    MW: 28587.4 Da    PI: 7.6083
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM76021.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.80.000367698123
                EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                ++C++C k F ++  L  H++ H
  OWM76021.1 76 FECQYCLKEFANSQALGGHQNAH 98
                89******************988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 260 aa     Download sequence    
MSRETATRDV VSNLSSTSGD GNNAIFSSNS NKLRLFGFEL IDPLSSIKPV ADGDGESVNS  60
SSIPGNLPEN STGKRFECQY CLKEFANSQA LGGHQNAHKK ERMKKKRLQL QARKAGLSYY  120
YLKPASQNKL RYLTNYDDGD MVTWPYHHQF VVGHEESSSA SQISFSTLDQ PEAAYDLIGS  180
RWAANWQARY DLSAAGNNIS FQVQENQNNL GLTHTDAAGS SPGEDHRHSL TSTVTNQSCK  240
SPLDLQLSLG LRSNCLRSSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06650.16e-16C2H2 family protein