PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM76083.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

TALE

Protein Properties

Length: 172aa MW: 19811.5 Da PI: 9.0903

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM76083.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	29.5	1.3e-09	115	149	21	55
HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS Homeobox 21 knrypsaeereeLAkklgLterqVkvWFqNrRake 55 k +yp++++++ LA+++gL+++q+ +WF N+R ++ OWM76083.1 115 KWPYPTEADKKILADSTGLDQKQINNWFINQRKRH 149 679*****************************985 PP
2	ELK	29.2	2.1e-10	70	90	2	22
ELK 2 LKhqLlrKYsgyLgsLkqEFs 22 LK++Ll+K++++++sLk EFs OWM76083.1 70 LKDRLLHKFGSHISSLKLEFS 90 9*******************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 172 aa Download sequence
MVGEFRHVLL TVVNSRCRFD GIIYACSSST VSPLAILTLD EGFVSSDEEF SGGEVEASLE 60 AQPRSMDRGL KDRLLHKFGS HISSLKLEFS KKKKKGKLPK EARQTLLEWW NVHYKWPYPT 120 EADKKILADS TGLDQKQINN WFINQRKRHW KPSESMQFGL MNNQPGQFYS DD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G23380.1	9e-53	TALE family protein