PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM76171.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family GRAS
Protein Properties Length: 521aa    MW: 57666.9 Da    PI: 6.1242
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM76171.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS356.44.3e-1091455191374
        GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlar.svselykal....ppsetseknsseelaalklfsevsPilkfs 94 
                 lv++L++ Aeav+ +d+  a+alL++l+ +a   g+++qR+a++f+++L+ rla  +  + + +l    +p + + + +se+  al+l +e++P+++f+
  OWM76171.1 145 LVQQLVAGAEAVACRDKVHASALLSELQARALVFGTSFQRVASCFVQGLSDRLALvQHLGAVGILgqggNPAPRRGTMTSERKEALRLVYEICPYIQFG 243
                 689**************************************************98333333333321136677776679******************** PP

        GRAS  95 hltaNqaIleavegeervHiiDfdisqGl....QWpaLlqaLasRpegpp.slRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrled 188
                 h++aN  ++ea+ege+ vH+iD++++ Gl    QW +L+++La Rp+gpp +lRiTg+g     s + l ++g+ L+++ ++lg++fef + ++++le+
  OWM76171.1 244 HFVANASVMEAFEGESSVHVIDLGMTLGLpcghQWWNLMHSLAHRPGGPPhKLRITGIGY----SIDCLCAIGNDLERYSKSLGMNFEFLA-IENSLEN 337
                 ***********************9987544444*************888868********....9**************************.7****** PP

        GRAS 189 leleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvEr 287
                 l++e+++v++gEal++n++lqlh +++es    +   +vL+++ +lsP+++v+veq+++hn++ Fl rf+eal+yysa+fdsl++ lp+ +  r+k+E+
  OWM76171.1 338 LRVEDFNVEEGEALVINSILQLHCVVKESRGALN---SVLQMLHKLSPRLLVLVEQDSSHNGPFFLGRFMEALHYYSAIFDSLDVMLPKYDTRRAKMEQ 433
                 **************************88877777...8************************************************************* PP

        GRAS 288 ellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvSaWr 374
                 +++++ei+n+v+ceg +r+erhe+  +Wr+r+++aGF+p+p++  + +q+k  l + k +dg++v ee+g+lvlgW+ +p+v++S+W+
  OWM76171.1 434 FFFAEEIKNIVSCEGPARVERHEKIDQWRRRMSRAGFQPAPIK--MLAQVKQWLGESKaWDGFTVVEEKGCLVLGWNLKPMVAASCWK 519
                 *****************************************97..67899999999999****************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 521 aa     Download sequence    
MKSGLCLATF SCKNNDDGDG LDLKISSMES YSLQFVPKLE SFDEPCQWTS VPLSGEARNS  60
KRAKLGNIAE ESVGSNSGSI YSICSSMSSN SLNGLPGLHF RDHVRAYTQR FLAVEAMEEA  120
AAAMIWGSQV DEAEEDGSGV DEMRLVQQLV AGAEAVACRD KVHASALLSE LQARALVFGT  180
SFQRVASCFV QGLSDRLALV QHLGAVGILG QGGNPAPRRG TMTSERKEAL RLVYEICPYI  240
QFGHFVANAS VMEAFEGESS VHVIDLGMTL GLPCGHQWWN LMHSLAHRPG GPPHKLRITG  300
IGYSIDCLCA IGNDLERYSK SLGMNFEFLA IENSLENLRV EDFNVEEGEA LVINSILQLH  360
CVVKESRGAL NSVLQMLHKL SPRLLVLVEQ DSSHNGPFFL GRFMEALHYY SAIFDSLDVM  420
LPKYDTRRAK MEQFFFAEEI KNIVSCEGPA RVERHEKIDQ WRRRMSRAGF QPAPIKMLAQ  480
VKQWLGESKA WDGFTVVEEK GCLVLGWNLK PMVAASCWKC N
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66350.15e-80GRAS family protein