PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM76278.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family ERF
Protein Properties Length: 226aa    MW: 24721.7 Da    PI: 10.1993
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM76278.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP265.11.5e-2056105255
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                 +y+GVr+++ +g+W+AeIrdp   + + +r++lg+f taeeAa a+++a+++++g
  OWM76278.1  56 HYRGVRQRP-WGKWAAEIRDP---N-KaARVWLGTFETAEEAAMAYDRAALRFKG 105
                 7********.**********9...3.35************************988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 226 aa     Download sequence    
MVAVLAQVMG SSPHDQRPVT MIDSTRMAVP RVAHIERETA SSHLIPDQES TMRRRHYRGV  60
RQRPWGKWAA EIRDPNKAAR VWLGTFETAE EAAMAYDRAA LRFKGAKAKM NFPERVQGLG  120
YYDTPKVVMS SSQANNPPIS MPSQEVHFPD LTQYAQLLSS NNTDIPLLIN SNISFISQGT  180
TLGMHTSSPS SSSSSSTPSS STTSTQQQGS SSSGFRGKGK SLDPGY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G61890.14e-35ERF family protein