PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM76286.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family ERF
Protein Properties Length: 177aa    MW: 19329.4 Da    PI: 10.173
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM76286.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.71.9e-20554255
         AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                +y+GVr+++ +g+W+AeIrdp+    + +r++lg+f taeeAa a++ a+++++g
  OWM76286.1  5 HYRGVRQRP-WGKWAAEIRDPK----KaARVWLGTFETAEEAAMAYDTAALRFKG 54
                7********.**********94....45************************988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 177 aa     Download sequence    
MRRRHYRGVR QRPWGKWAAE IRDPKKAARV WLGTFETAEE AAMAYDTAAL RFKGAKAKLN  60
FPERVQGLGY YDTPELVMSS SQANNPPISM PSREAHFPDL IQYAKLLSSN NTDIPLLDNS  120
NISFVSQGTT PGMHTSSPSS SSSSSSSISS SSTTSTQQQG SSSSDFRGKG KSLDPGY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13330.11e-32ERF family protein