PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM76366.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

NAC

Protein Properties

Length: 226aa MW: 25326.1 Da PI: 6.031

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM76366.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	94.8	1.4e-29	14	150	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk...lelee.........vikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatg 87 lppGfrF+Ptdeel+ ++L +k +++ + +i+++ ++ +Pw+L+ k+ a+ +++++Fs+ +r+nr+t+sgyWk OWM76366.1 14 LPPGFRFSPTDEELILHFLYPKSSSSAsssS---SstsslfsysIIPDLLAFQPDPWELNGKAIASGNQYFYFSR--------QRQNRSTSSGYWKDLE 101 79******************999985440...34455666658**********9554454555555554........3789******** PP NAM 88 kdkevlsk..kgelvglkktLvfy......kgrapkgektdWvmheyrl 128 +++++s+ +g ++g+kk Lvf+ g a +ge+t+Wvm+eyrl OWM76366.1 102 MEEPIFSRaaNGIKIGTKKLLVFHigggrrCGAAIEGEETNWVMEEYRL 150 ***9888999******88776558999**********98 PP

Sequence ? help Back to Top
Protein Sequence Length: 226 aa Download sequence
MDEAARGRSC SLKLPPGFRF SPTDEELILH FLYPKSSSSA SSSSSSTSSL FSYSIIPDLL 60 AFQPDPWELN GKAIASGNQY FYFSRQRQNR STSSGYWKDL EMEEPIFSRA ANGIKIGTKK 120 LLVFHIGGGR RCGAAIEGEE TNWVMEEYRL IPRDGSTVNG YSHKRFGNQR QEHGSLVLCR 180 VHERKNYGSN QRCYRGNCDD GGSEISSLDE MFMALDDDLD DVTSPC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G64530.1	9e-42	NAC family protein