PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM76420.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family GeBP
Protein Properties Length: 302aa    MW: 34288.7 Da    PI: 8.7582
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM76420.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57357.34.4e-18105193397
      DUF573   3 fqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWg 97 
                 fqr+wse  e+ +++Gl++  ++   +p  +++++ye +k++i + v+k+ l+ Ki +LKkKfk + kk+k+g e    ++++++ + l+ k Wg
  OWM76420.1 105 FQRIWSEPEEMEVMKGLVEVSKN---KPEYELNDIYECIKQKIPSSVTKRRLSGKIWNLKKKFKSCDKKVKQGAE---LSPQEENFLVLAVKAWG 193
                 9******************9544...46889**************************************999998...56778889999999997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 302 aa     Download sequence    
MEPKRSFGDD SPSASSEEDQ EEDEEEEEEE DQEEEQKKQQ LQPSGSETES KPSPDRAVKQ  60
NGKLVPSEPA ERKKRSAEGI VSNGEAASKR VKTKSNSKAQ KKQFFQRIWS EPEEMEVMKG  120
LVEVSKNKPE YELNDIYECI KQKIPSSVTK RRLSGKIWNL KKKFKSCDKK VKQGAELSPQ  180
EENFLVLAVK AWGSVENLVK GRIAAKKPVK GKTAAARGLE GHEGTSVSAL SRRLLKGIED  240
VGGGWSLNEE FVRKKTYLVD ERKRVELDQR WKRLEEKELQ LIVERARLIN DHAAVICQTV  300
TH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G11510.16e-09GeBP family protein