PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM76513.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family MYB_related
Protein Properties Length: 347aa    MW: 37434.8 Da    PI: 7.4543
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM76513.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding42.12e-13100144347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE+ l++ + ++lG+g+W+ Iar   + Rt+ q+ s+ qky
       OWM76513.1 100 PWTEEEHRLFLIGLQKLGKGDWRGIARNYVTSRTPTQVASHAQKY 144
                      8*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 347 aa     Download sequence    
MTRRCSHCSN NGHNSRTCPT RGAGAGPSSG VKLFGVRLID GSMKKSASMG NLSAHFHSSS  60
ASPNPGSPDP GQVHVPEGYL SDDTAHGSSH RRGERKRGVP WTEEEHRLFL IGLQKLGKGD  120
WRGIARNYVT SRTPTQVASH AQKYFIRQTH AGRRKRRSSL FDMAPDVDFD PPTVPEEPSL  180
PPPAGEADNT NSMPSLDLSL GSEVKPMETS PQEPHKENAE NLVPPAGFPL FIPGYFQAQI  240
HVPVPFPIWQ PIVAQQEDDK CTETTSQHQV LKPIPLLPKE TVNVDELVGM SQLSLIEAEG  300
GSNPKETPSL SLKLTGEPSR QSAFHANSGA VSGSDLSTGK NSPIQAV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G16350.11e-99MYB_related family protein