PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM76574.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family LBD
Protein Properties Length: 258aa    MW: 28935.5 Da    PI: 4.3945
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM76574.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF26038.43.6e-121425899
      DUF260 58 msslvyeAearardPvyGavgvilklqqqleqlkaelallke 99
                m++++y+++ara+dPv+G++g++++lq+q+e  +ael+l+ +
  OWM76574.1  1 MRTIIYQSDARAHDPVSGCYGMVRDLQRQIELCQAELELVLR 42
                89***********************************98765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 258 aa     Download sequence    
MRTIIYQSDA RAHDPVSGCY GMVRDLQRQI ELCQAELELV LRQLDFFRQQ EAAAALGCDL  60
MSGPNATAAT STDPFVQAFG ALPSDEPHQA NNNGLVDEFN VNHNNVNSDA VAWAMQDCSS  120
PTSNGNNGVN VMPHHHQQHQ QLFHQHVGDG SDDHDNDNGK QMQGFNMVDQ CNDMKPLILD  180
LPPDDHREQH HDLGFSSDVA INRSNQPILE MDQCRMTKIR EDDEEDQNNQ RQGVIDFHQD  240
HNDLKDAATF FTLTNCSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G13850.17e-15LBD family protein