PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM77078.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

Dof

Protein Properties

Length: 268aa MW: 28604.6 Da PI: 9.5107

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM77078.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	125.1	2.2e-39	17	76	2	61
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 +++ lkcprC+stntkfCyynny+lsqPr+fCk+CrryWtkGGalrn+PvGgg+rk+ k+ OWM77078.1 17 EQERLKCPRCESTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGTRKSAKR 76 57899***************************************************9775 PP

Sequence ? help Back to Top
Protein Sequence Length: 268 aa Download sequence
MQDPSAFLQP VKPQFPEQER LKCPRCESTN TKFCYYNNYN LSQPRHFCKN CRRYWTKGGA 60 LRNIPVGGGT RKSAKRPTNA KRPSPGPVET EPRPEGSSQA RSPRLIEPSH GLSQPAVPQQ 120 SAQGPSPGPS PARIVHPGSG ILGLGTDPER RLLDTGGSFS SLLTSNLQFG TLLEGLNPNS 180 SGPKVMQFGV LGENLNSGTS LNPSRGPNGV QGQKSQSNNM PDSDCLSLQN GNGNGNGNGG 240 NGGEESSCWG NSNGWPDLAI YTPSSRYQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G51700.1	1e-41	Dof family protein