PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM77149.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

HSF

Protein Properties

Length: 371aa MW: 41195.4 Da PI: 5.8952

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM77149.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	115.8	2.6e-36	54	144	2	101
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 Fl+k+y+i++d+++++++sws++g+sfvv+d++efa ++Lp+yFkh+nf+SFvRQLn+YgF+k++ ++ weF+++ F +g+++l+++ik OWM77149.1 54 FLTKTYDIVDDPSTDHVVSWSATGSSFVVWDPNEFAAHLLPRYFKHNNFSSFVRQLNTYGFRKIDPDQ---------WEFANEGFLRGHRHLVKTIK 141 9**************************************************************999.........****************** PP XXX CS HSF_DNA-bind 99 rkk 101 r+k OWM77149.1 142 RRK 144 *98 PP

Sequence ? help Back to Top
Protein Sequence Length: 371 aa Download sequence
MNLLSPVKQE YHGGGPSSRS SDPGGSGGGG GGGDRPPMMP EPMEGLHEVG PPPFLTKTYD 60 IVDDPSTDHV VSWSATGSSF VVWDPNEFAA HLLPRYFKHN NFSSFVRQLN TYGFRKIDPD 120 QWEFANEGFL RGHRHLVKTI KRRKPPPNSS TQQAVGLCVG VGRFGTDGEA DRLRRDKQVL 180 MMELVKLRQQ QQNTVLFLQS MEERLRGTEK KQKQMMAFLA RAMRSPTFLN QLLQQKEKRK 240 ELEEAITKKR RRPIDHGPSS SQGVAEAAAA AVASMGSVKA EPIELRKHGA EVSELEALAL 300 EMQGLRRAKQ GGAKGNLEGE GGLGEAENLD KELDEGFWEE LLCERLDEED EEDEDVDVLA 360 DRLGYLGSSL K

Sequence ? help Back to Top

Protein Sequence Length: 371 aa Download sequence

MNLLSPVKQE YHGGGPSSRS SDPGGSGGGG GGGDRPPMMP EPMEGLHEVG PPPFLTKTYD  60
IVDDPSTDHV VSWSATGSSF VVWDPNEFAA HLLPRYFKHN NFSSFVRQLN TYGFRKIDPD  120
QWEFANEGFL RGHRHLVKTI KRRKPPPNSS TQQAVGLCVG VGRFGTDGEA DRLRRDKQVL  180
MMELVKLRQQ QQNTVLFLQS MEERLRGTEK KQKQMMAFLA RAMRSPTFLN QLLQQKEKRK  240
ELEEAITKKR RRPIDHGPSS SQGVAEAAAA AVASMGSVKA EPIELRKHGA EVSELEALAL  300
EMQGLRRAKQ GGAKGNLEGE GGLGEAENLD KELDEGFWEE LLCERLDEED EEDEDVDVLA  360
DRLGYLGSSL K

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	238	252	KRKELEEAITKKRRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G22830.1	5e-97	HSF family protein