PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM77262.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family C2H2
Protein Properties Length: 412aa    MW: 46440.1 Da    PI: 6.1263
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM77262.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.80.000176892123
                EEETTTTEEESSHHHHHHHHHH..T CS
     zf-C2H2  1 ykCpdCgksFsrksnLkrHirt..H 23
                y+C++C+k ++++  L +H+++  H
  OWM77262.1 68 YSCGICNKGCRSNKALDQHLNSrnH 92
                99******************98666 PP
Sequence ? help Back to Top
Protein Sequence    Length: 412 aa     Download sequence    
MPGLTCNACN KEFNDDAEQK LHYKSEWHRY NLKRKVAGVP GVTETLFLAR QAAIAQERNK  60
SSETPMLYSC GICNKGCRSN KALDQHLNSR NHIARVSQGT GNQEEERTTV RPLPHRAVNK  120
PVTRKQLANV ESEESEDEWE EVGSDEELAG EATKSMSGLN EDEDHDMEEV SGEEDDDLFE  180
LDPSCCFMCD HKHNSIDRCM VHMHKQHGFF IPDVAYLKDP KGLLTYLGLK VKRDYMCLYC  240
NDRCHPFSSV EAVRKHMAAK GHCKVHYGDG GEEEEAELEE FYDYSSSYMD EDGKQLVAVG  300
DSGSNVQLGT AGSELIITRR TDAGVSTKSL GSREYMCYYR QKPRPSSVND AALTIALASS  360
YRSMGLATVQ SREQMVRMKV MKEMNRSGVE AMRTKIGMKS NVIRNLPKNV PY