PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM77291.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

MYB

Protein Properties

Length: 293aa MW: 33419.9 Da PI: 6.9778

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM77291.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	51	3.3e-16	13	60	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+W++eEde+l ++k +G g+W+ +++ g++R++k+c++rw +yl OWM77291.1 13 RGAWSAEEDEILTYYIKSHGEGQWRDLPQRAGLKRCGKSCRLRWVNYL 60 89********************************************97 PP
2	Myb_DNA-binding	49.3	1.2e-15	71	110	6	47
HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 6 teEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +eE+el+++ +k+lG++ W++Ia++++ gRt++++k++w++ OWM77291.1 71 EEEEELILRMHKLLGNR-WALIAARLP-GRTDNEIKNYWNTN 110 8**************.*****.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 293 aa Download sequence
MRRPCCAKEG LNRGAWSAEE DEILTYYIKS HGEGQWRDLP QRAGLKRCGK SCRLRWVNYL 60 RPYIKRGNIC EEEEELILRM HKLLGNRWAL IAARLPGRTD NEIKNYWNTN LRKRVRDRDR 120 QKFGMQTDNE SGQGRLRIAN SIVSGEAHRV IRTKAVRCTK VLFQPQPLEK EQSHAMLSDV 180 PLTDSGNPLS SSHYPNDKNI DFLVDFGIDD LLAPDIDLLM SSYSMVHADK GIINEHKDVT 240 HVNFPAEESP CAPMGCARRF VVGGEHFDLN GEIDFNALSS LLGEGCDDEI FAY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G35550.1	3e-61	MYB family protein