PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM77416.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

NAC

Protein Properties

Length: 310aa MW: 35390.6 Da PI: 7.233

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM77416.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	106.4	3.6e-33	62	203	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk......leleevikevd....iykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra......tk.sgy 82 lp+G++F+Ptd+e++ e+L++k+ ++ ++ e+ik+++ i+ ++P++Lp v+++ + +fF++ +k+y+tg+rk+r t+ + + OWM77416.1 62 LPAGVKFDPTDHEIL-EHLEAKAMEDGkrlhplID--EFIKTLEgdngICCTHPEKLP-GVRSDGQIRHFFHRPSKAYTTGNRKRRRihmgknTEgETR 156 799*********9.8999998877756754422..23444423345******.667777888**************7466665224778 PP NAM 83 WkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128 W++tgk++++ls +g+++g kk+Lv+y +gr++k+ekt+Wvmh+y+l OWM77416.1 157 WHKTGKTRPILS-GGKVKGFKKILVLYtnHGRQRKPEKTNWVMHQYHL 203 ********.9*********7778*************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 310 aa Download sequence
MNIWCPTNDS GEVEEAADKI ITSISHVSSD SDYRGALITY CLSCGHPIEL YDQGRIHELP 60 GLPAGVKFDP TDHEILEHLE AKAMEDGKRL HPLIDEFIKT LEGDNGICCT HPEKLPGVRS 120 DGQIRHFFHR PSKAYTTGNR KRRRIHMGKN TEGETRWHKT GKTRPILSGG KVKGFKKILV 180 LYTNHGRQRK PEKTNWVMHQ YHLGDNKEEK DGELVVSKVF YQTQPKQSGQ TRKKEMETTT 240 NYSRDESLHG NQLPEDRCNY NNYSPVQGGR ESSNDQISPA QLRLILNSVI GQEDESFFAD 300 QFIKMQEENS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	140	144	RKRRR
2	141	145	KRRRI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G28500.1	1e-109	NAC family protein