PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM77418.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family NAC
Protein Properties Length: 310aa    MW: 35396.3 Da    PI: 6.5114
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM77418.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM102.46e-32622031128
         NAM   1 lppGfrFhPtdeelvveyLkkkvegkk......leleevikevd....iykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra.......tksgy 82 
                 lp+G++F+Ptd+e++ e+L++k+ ++       +  +e+ik+++    i+ ++P++Lp  v+++ +  +fF++ +k+y+tg+ k+r         ++ +
  OWM77418.1  62 LPAGVKFNPTDHEIL-EHLEAKAMEDGkrlhplV--DEFIKTLEgdsgICCSHPEELP-GVRSDGQIRHFFHRPSKAYSTGNWKRRRihmgkntEDETR 156
                 799***********9.899999877775775431..233554423344**********.667777888**************99997466666333788 PP

         NAM  83 WkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128
                 W++tgk++++ls +g+++g kk+Lv+y  +gr++k+ekt+Wvmh+y+l
  OWM77418.1 157 WHKTGKTRPILS-GGKVKGFKKILVLYtnHGRQRKPEKTNWVMHQYHL 203
                 ************.9*************7778***************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 310 aa     Download sequence    
MNTWCSTNDY GEVEEAADKI TTSISCESGD SDYSGALITY SLSCGHPIEL YDQGRIHELP  60
GLPAGVKFNP TDHEILEHLE AKAMEDGKRL HPLVDEFIKT LEGDSGICCS HPEELPGVRS  120
DGQIRHFFHR PSKAYSTGNW KRRRIHMGKN TEDETRWHKT GKTRPILSGG KVKGFKKILV  180
LYTNHGRQRK PEKTNWVMHQ YHLGNNEEEK DGELVVSKVF YQTQPKQSGQ TRKKEMETTI  240
NYSRDQSLHG NQLPEDRYNY NNYSPVQGGR ESSNDQINPA QLRLILNSVI GQEDESLFAD  300
QFIKMQEENS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1141145KRRRI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G28500.11e-105NAC family protein