PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM77431.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family ERF
Protein Properties Length: 235aa    MW: 25492.2 Da    PI: 10.217
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM77431.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP267.42.7e-212473255
         AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                +y+GVr ++ +gr++AeIrdp   gk+ r++lg+f+taeeAa+a++aa+++++g
  OWM77431.1 24 HYRGVRKRP-WGRYAAEIRDP---GKKSRVWLGTFDTAEEAARAYDAAAREFRG 73
                6********.**********8...557*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 235 aa     Download sequence    
METKNTAARV GGATSAAAAK DVVHYRGVRK RPWGRYAAEI RDPGKKSRVW LGTFDTAEEA  60
ARAYDAAARE FRGPKAKTNF PDMPSDIQQI TRTANHRPNK ISYRNDRNRT DVNSRSVSPS  120
QNSTVESSGH ERELVPDSQP VRLDLINLLH RGGGLPFQHQ QLPAASHVLY LDAMMRAAAA  180
KWHPQSRPPP PPAAGTGSGG AHSSDSDAST VVDGNDGDRS KGRVLDLDLN LPATE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G15210.16e-23ERF family protein