PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM77618.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family C2H2
Protein Properties Length: 99aa    MW: 11864.3 Da    PI: 5.9062
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM77618.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.50.000462641116
                EEETTTTEEESSHHHH CS
     zf-C2H2  1 ykCpdCgksFsrksnL 16
                ++C++C + F+++  L
  OWM77618.1 26 FECHYCYRNFPTSQAL 41
                89*********99766 PP
Sequence ? help Back to Top
Protein Sequence    Length: 99 aa     Download sequence    
MVENMNSSEE VKDVNNTENG ESRRRFECHY CYRNFPTSQA LGGYQIVHNR ECQNAKRTHL  60
QSTMVHDSDP SLLLFHFIYV HFRLIEEEEE KDVRVMVLW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G41940.12e-15C2H2 family protein