PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM77627.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

bHLH

Protein Properties

Length: 140aa MW: 15650 Da PI: 4.3727

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM77627.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	11.7	0.00047	1	18	38	55
STCHHHHHHHHHHHHHHH CS HLH 38 lsKaeiLekAveYIksLq 55 ++Ka+i e A+ YI +Lq OWM77627.1 1 MNKATIIEDAITYITELQ 18 59**************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 140 aa Download sequence
MNKATIIEDA ITYITELQKN VKVLSNQLME MEVSSIEDAK ALSKETDAPE ETEENRIEPD 60 VKVIYVNGNK LWMKMIFENR RGRLTKLMEA LSAHGFELND VSVTTSMGAT LISSCVEGTL 120 GEVLEASSMS ELLQEIIKHI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G21330.1	2e-23	bHLH family protein