PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM77635.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

GeBP

Protein Properties

Length: 417aa MW: 46005.8 Da PI: 5.3663

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM77635.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	101	1.1e-31	195	285	2	97
DUF573 2 lfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWg 97 lfqr+wseeDei+lL G+i+f +k+g++ps +i+ f+ef+k+++ f+v + qlv+Kir+ KkKf +k k + +fs+++dq +++lskk+W+ OWM77635.1 195 LFQRVWSEEDEIALLEGMIEFSEKRGVDPSTNINSFHEFIKDRLRFDVVQGQLVTKIRNCKKKFMNKIGK-----DRVFSRPNDQRAYDLSKKLWD 285 79*************************************************************99999.....99****************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 417 aa Download sequence
MAPKRPTPAD EQPPPAVSSD EESSESVRSE EEEEDEENES YDSDEPKGTQ QKGPQPKPSS 60 ALPPRAQSKP QKPVSSSESE SESESEDEPT AKLIARPNPK QQKSAASSES DSESDEPKGK 120 PAESDSESDS DVTPVVAAKP VEIQGTPQSK KLNLKRPRSE TTSAAEDAAK TPSKKSTATS 180 RSSHSTGEES SKKTLFQRVW SEEDEIALLE GMIEFSEKRG VDPSTNINSF HEFIKDRLRF 240 DVVQGQLVTK IRNCKKKFMN KIGKDRVFSR PNDQRAYDLS KKLWDSQEGI IGESVPKANG 300 TATKKKKKTA GNTSAAMVVP PSPPTKVKGK DEMAETQHGD ATSMSLCEVE LSRFSGGRLN 360 CSFLRRGLES INGSKREEME KEWEKLQVAE LHLQANRARL VQEHTNLIMN AYNKSDQ

Sequence ? help Back to Top

Protein Sequence Length: 417 aa Download sequence

MAPKRPTPAD EQPPPAVSSD EESSESVRSE EEEEDEENES YDSDEPKGTQ QKGPQPKPSS  60
ALPPRAQSKP QKPVSSSESE SESESEDEPT AKLIARPNPK QQKSAASSES DSESDEPKGK  120
PAESDSESDS DVTPVVAAKP VEIQGTPQSK KLNLKRPRSE TTSAAEDAAK TPSKKSTATS  180
RSSHSTGEES SKKTLFQRVW SEEDEIALLE GMIEFSEKRG VDPSTNINSF HEFIKDRLRF  240
DVVQGQLVTK IRNCKKKFMN KIGKDRVFSR PNDQRAYDLS KKLWDSQEGI IGESVPKANG  300
TATKKKKKTA GNTSAAMVVP PSPPTKVKGK DEMAETQHGD ATSMSLCEVE LSRFSGGRLN  360
CSFLRRGLES INGSKREEME KEWEKLQVAE LHLQANRARL VQEHTNLIMN AYNKSDQ

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	304	330	KKKKKTAGNTSAAMVVPPSPPTKVKGK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G25210.1	8e-23	GeBP family protein