PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM77668.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family MYB_related
Protein Properties Length: 74aa    MW: 8628.25 Da    PI: 4.0584
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM77668.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding35.81.9e-112568146
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46
                     ++ ++ +E+ l+++  ++ G + W++Ia +++ gRt++++  +w++
       OWM77668.1 25 KLEFSDDEETLIIRMYNLVGER-WSLIAGRIP-GRTAEEIEKYWNS 68
                     6789******************.*********.***********85 PP
Sequence ? help Back to Top
Protein Sequence    Length: 74 aa     Download sequence    
MADSEHSSSD DTYVDSREET SQESKLEFSD DEETLIIRMY NLVGERWSLI AGRIPGRTAE  60
EIEKYWNSRY STSE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G01380.11e-18MYB_related family protein