PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM78005.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

NF-YB

Protein Properties

Length: 188aa MW: 20814 Da PI: 5.4078

Description

NF-YB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM78005.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YB	174.7	9.5e-55	32	127	2	97
NF-YB 2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelegek 97 reqdr+lPianv+rimk++lP nakisk+aket+qecvsefisfvt+easd+cq+ekrkt+ngdd++wal lGf+dyveplk yl++yre+egek OWM78005.1 32 REQDRLLPIANVGRIMKQILPPNAKISKEAKETMQECVSEFISFVTGEASDRCQKEKRKTVNGDDICWALRALGFDDYVEPLKRYLNRYREFEGEK 127 89********************************************************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 188 aa Download sequence
MVDNNFSSNI ISPSDTKCSS FTETADSSGI IREQDRLLPI ANVGRIMKQI LPPNAKISKE 60 AKETMQECVS EFISFVTGEA SDRCQKEKRK TVNGDDICWA LRALGFDDYV EPLKRYLNRY 120 REFEGEKAAS NSHNKGGSSS TNNIDSNDGI NYSGGSSGRV CENEDQAPMF LKFNVGERSN 180 SGSLSRRC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G47810.1	6e-62	NF-YB family protein