PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM78118.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family ERF
Protein Properties Length: 235aa    MW: 25574.2 Da    PI: 4.8867
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM78118.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.24.8e-194999155
         AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                + y+GVr ++ +g+Wv+eIr+p++   + r++lg+f t+e+Aa+a++ a+++++g
  OWM78118.1 49 PVYRGVRMRS-WGKWVSEIREPRK---KSRIWLGTFPTPEMAARAHDVAALSIKG 99
                68*****998.**********843...6***********************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 235 aa     Download sequence    
MTDPEVEPHS SAESESSSSS STGNSGLQAV EKRPRQSTKS SSSSSFKHPV YRGVRMRSWG  60
KWVSEIREPR KKSRIWLGTF PTPEMAARAH DVAALSIKGA SAVLNFPHLT SLLPRPESPL  120
PRHVQAAATR AAAMTELDPS SSSSSSSHSL PSSEPSTSPS SVSESDDQEL GQIIELPNIE  180
WGEFALVDTV VDRWAEPPQW VEEGAAEFGV DYFLEQMLAA DSNDFPSKHE GLVRD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G25810.11e-38ERF family protein