PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM78583.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family bHLH
Protein Properties Length: 245aa    MW: 27510.1 Da    PI: 5.7787
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM78583.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH11.70.00051021381554
                 HHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH  15 riNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                  i+ +f eL ++l +    + +K +Ka iL  Av+ + +L
  OWM78583.1 102 SIKLRFLELTSILEPG---KPPKTDKAVILSDAVRTVTQL 138
                 68999**********9...99*************988887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 245 aa     Download sequence    
MEIDSMDGSN WLADYGYVED EVDFFQPSSG FASWASPAFG CSSDLSVEVN YSFTDSDSLK  60
MPSCRKRLKP DSCNALGSKA GREKTRRDKL NERHELSHEL ISIKLRFLEL TSILEPGKPP  120
KTDKAVILSD AVRTVTQLRA ETEELKESNG QLQEKIKELK AEKNELRDEK QRLKADKEKL  180
EQQVKAMSVQ MSYLPHLSAM FAAQGQATSN KLMPYIGFPG AAMWQFMSPS VIDTSQDHVQ  240
RPPAA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G54680.18e-76bHLH family protein