PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM78658.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family bHLH
Protein Properties Length: 238aa    MW: 27188.5 Da    PI: 9.9834
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM78658.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH22.12.7e-072378255
                HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-..STCHHHHHHHHHHHHHHH CS
         HLH  2 rrahnerErrRRdriNsafeeLrellPkaskapskK..lsKaeiLekAveYIksLq 55
                r+  + +E++RR++++  ++ L +l+P +++++++K   s  +   +A +YIk L+
  OWM78658.1 23 RVERKTMEKNRRNKMKYLYSMLNSLVPRNYNNQDPKeaKSLPDQIDEAAKYIKRLE 78
                677889**********************886777773366679**********995 PP
Sequence ? help Back to Top
Protein Sequence    Length: 238 aa     Download sequence    
MDQRPGKRSG PPQAAGASSS STRVERKTME KNRRNKMKYL YSMLNSLVPR NYNNQDPKEA  60
KSLPDQIDEA AKYIKRLEAR VNEAQEKRNT LAGRKRLHSS TAPDSSASKS AVQTFKSPKM  120
DIQVHWPALE VTLISEMCNH FIFLDAVRVL REERAEVLNV NFSVVGSSVY HLIRAEIGEG  180
TEAATITQRM RNLVNGSSSN DSHQSQQQLQ QQQLHHPWDF QISPNIWEFD MFHAWHST
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G20970.11e-25bHLH family protein