PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM78677.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

NAC

Protein Properties

Length: 335aa MW: 37412.6 Da PI: 8.5859

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM78677.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	105.5	6.6e-33	82	225	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkklelee.......vikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra.........tksgy 82 lp+G++F+P d+el+ e+L+ kv++++ +l++ +++ +i++++P++Lp v+++ + +fF++ +k+y+tg+rk+r+ + + OWM78677.1 82 LPAGVKFDPMDQELL-EHLEGKVRSDQRNLHRlidefipTLEGEnGICYTHPEKLP-GVSKNGQIRHFFHRPSKAYTTGNRKRRKvhtdnddqaGGETR 178 799**********.99***994443323332222333336******.555566778**************756666655433778 PP NAM 83 WkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128 W++tgk+++v+ kgel+g kk+Lv+y g+++k+ekt+Wvmh+y+l OWM78677.1 179 WHKTGKTRPVFG-KGELKGFKKILVLYtnYGKQRKPEKTNWVMHQYHL 225 ********.999*******6657999999*******98 PP

Sequence ? help Back to Top
Protein Sequence Length: 335 aa Download sequence
MTWCSDQKTG QDDDQSRETS SVDPSSPSKT KEQPAAIANA KSSHQLHHHQ PPNIPVRTCP 60 SCGHEINLIK DQGGGINELP GLPAGVKFDP MDQELLEHLE GKVRSDQRNL HRLIDEFIPT 120 LEGENGICYT HPEKLPGVSK NGQIRHFFHR PSKAYTTGNR KRRKVHTDND DQAGGETRWH 180 KTGKTRPVFG KGELKGFKKI LVLYTNYGKQ RKPEKTNWVM HQYHLGDNEE EKDGELVVSK 240 VFYQTQPRQC GNNNHNNHNN INSNLGVGKG SSMGVGSKMN GTVTPEGSHC LKNQAVVEYF 300 NSPFISFDQG TQNRGNSQQM LPHFAVHDGS SLVPN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G28500.1	1e-113	NAC family protein