PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM78729.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family WRKY
Protein Properties Length: 259aa    MW: 28719.9 Da    PI: 5.9194
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM78729.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY90.99.8e-2977134359
                 -SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                 D ++WrKYGqK++kgs++pr+YYrC+s+ gCp++k+vers+ dp+++ itY+ +H+h+
  OWM78729.1  77 DSWTWRKYGQKPIKGSPYPRGYYRCSSSkGCPARKQVERSRMDPTTLRITYSYDHEHT 134
                 99************************998****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 259 aa     Download sequence    
MERKSYGNPF VLEHPEDHPD LEPQNGPDPP SSEDETTRIG APSPKKRKGI QKRVVSIPID  60
RDVNGARSKG EAYPPPDSWT WRKYGQKPIK GSPYPRGYYR CSSSKGCPAR KQVERSRMDP  120
TTLRITYSYD HEHTSPAQGH SPAISPVAND PPQTEVSLDL SGFTGHPDLR CDAPLDLDWL  180
AADVASTSLM ENPVWTAGYC NELGADLAVG YDMMREEDET LFADLGELPE CTTVFGRKEV  240
DRTRRSRRLS AVPHAGSIG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58710.22e-57WRKY family protein