PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM78798.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

NAC

Protein Properties

Length: 386aa MW: 43085.6 Da PI: 7.5326

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM78798.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	184.5	2.4e-57	17	144	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgel 99 lppGfrFhPtdee++++yL kkv ++++++ +++ evd++k+ePwdLpk++k +ekewyfFs++d+ky+tg r+nrat+sgyWkatgkdke+++ k+ l OWM78798.1 17 LPPGFRFHPTDEEIITHYLSKKVMNRSFSA-SAMGEVDLNKCEPWDLPKRAKMGEKEWYFFSQKDRKYPTGMRTNRATESGYWKATGKDKEIYRGKNCL 114 79************************99.88***********99999*************************************99999 PP NAM 100 vglkktLvfykgrapkgektdWvmheyrle 129 vg+kktLvfy+grapkgekt+Wvmheyrle OWM78798.1 115 VGMKKTLVFYRGRAPKGEKTNWVMHEYRLE 144 **************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 386 aa Download sequence
MEEALSMSGG DPEIVHLPPG FRFHPTDEEI ITHYLSKKVM NRSFSASAMG EVDLNKCEPW 60 DLPKRAKMGE KEWYFFSQKD RKYPTGMRTN RATESGYWKA TGKDKEIYRG KNCLVGMKKT 120 LVFYRGRAPK GEKTNWVMHE YRLEGKFSYS NLPRAAKEEW VVCRIFHKSI GLKKPWSPMI 180 QGGIPRINAL MDDDLSSGSL PPLVDPASSA GPSSSFTDAE DYEFKGMANH SLSASMSRSS 240 GANIPYYNIP PNPSQNLVTS NNPSPNYPLN PNPNFSMMYN QVQNPTFLSV QGSTPLNPAL 300 FNQLGTIIRS DQPKCKVELE PFLSQSIISG RSQETGLSTD MNPEISSSSA ASKQEVASTR 360 PLNDLIEGSY IGPINSSDIL DFSWDY

Sequence ? help Back to Top

Protein Sequence Length: 386 aa Download sequence

MEEALSMSGG DPEIVHLPPG FRFHPTDEEI ITHYLSKKVM NRSFSASAMG EVDLNKCEPW  60
DLPKRAKMGE KEWYFFSQKD RKYPTGMRTN RATESGYWKA TGKDKEIYRG KNCLVGMKKT  120
LVFYRGRAPK GEKTNWVMHE YRLEGKFSYS NLPRAAKEEW VVCRIFHKSI GLKKPWSPMI  180
QGGIPRINAL MDDDLSSGSL PPLVDPASSA GPSSSFTDAE DYEFKGMANH SLSASMSRSS  240
GANIPYYNIP PNPSQNLVTS NNPSPNYPLN PNPNFSMMYN QVQNPTFLSV QGSTPLNPAL  300
FNQLGTIIRS DQPKCKVELE PFLSQSIISG RSQETGLSTD MNPEISSSSA ASKQEVASTR  360
PLNDLIEGSY IGPINSSDIL DFSWDY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G18270.1	1e-107	NAC family protein