PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM78861.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

G2-like

Protein Properties

Length: 236aa MW: 25772.8 Da PI: 9.5526

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM78861.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	104.3	7.3e-33	44	98	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+rlrWt++LH+rFv+a++qLGG+++AtPk +l++m+v++Lt++hvkSHLQkYRl OWM78861.1 44 KQRLRWTSDLHDRFVDAITQLGGPDRATPKGVLRVMGVPDLTIYHVKSHLQKYRL 98 79****************************************************8 PP
2	Myb_DNA-binding	56.6	6.1e-18	46	97	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT ++++++vda++qlGg+ t+k + r mg +t +++ks++qky+ OWM78861.1 46 RLRWTSDLHDRFVDAITQLGGPdraTPKGVLRVMGvPDLTIYHVKSHLQKYR 97 89*************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 236 aa Download sequence
MYHANNVAST SLGPHKAQGP QLASFEALAG SAAKNTSSAS GNGKQRLRWT SDLHDRFVDA 60 ITQLGGPDRA TPKGVLRVMG VPDLTIYHVK SHLQKYRLAN YLPDFPLDGA SDDKKTSKDS 120 SSGSDSFSGL QINEALRLQM EVQKRLHEQL EVQRQLQMRI EAQGTYLQKI IEEQQKLGGA 180 LETSEKSSSA QTGQKQKPDS TAEASVGPST QKKKQKLEDL PRVTECSTHS SDLAKN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G01060.1	2e-64	G2-like family protein