PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM79025.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family NF-YA
Protein Properties Length: 267aa    MW: 29909.4 Da    PI: 10.2969
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM79025.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA927.5e-29125178458
   CBFB_NFYA   4 lYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                 +YVN+KQy +I++RR++Rak+e+e++l ++ rkpy+heSRh hA+rRpRg+gGrF
  OWM79025.1 125 IYVNPKQYPAIIRRRESRAKAEQENRL-SRVRKPYMHESRHLHAKRRPRGCGGRF 178
                 9**************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 267 aa     Download sequence    
MIYFRGEEGI RSDNPNNGRL SPMPSGLWWT GFGSHQAAQV ESPPPQLKSS KSNKGHVAGQ  60
FTIHSGDCKD LMPEHRLKPA IAQHATCAKY QSIDPWYGVF SAYGPHLSGG IMLPLSSAAS  120
DGLVIYVNPK QYPAIIRRRE SRAKAEQENR LSRVRKPYMH ESRHLHAKRR PRGCGGRFLD  180
TKSSNPNNPE GETEKKKSFE RYHSSSQSSE VLQSENRTLN SSWRGTDSSR ASLSGYNEVT  240
SMYSGRDTVV NHTHWPFHFP SISKGKV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06510.22e-33NF-YA family protein