PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM79030.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

TALE

Protein Properties

Length: 700aa MW: 76343.2 Da PI: 8.184

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM79030.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	31.7	2.7e-10	410	447	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yp+ ++++ LAk++gLt +qV++WF N R + OWM79030.1 410 FEHflHPYPKDSDKQTLAKQTGLTRSQVSNWFINARVR 447 554459******************************88 PP
2	BELL	114.9	4.1e-37	270	341	1	72
BELL 1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 erqe+q+kkakL+++l+eV++rY+qy++ +q+v++sFe++ g+gsa++YtslAlk+iS++FrcL+daia+q+ OWM79030.1 270 ERQEVQMKKAKLMTMLDEVEQRYRQYHHHMQVVVASFEQALGVGSARSYTSLALKTISKQFRCLRDAIAGQV 341 79*******************************************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 700 aa Download sequence
MAAYFQHNSE SQAGDGLQTL VLMNPPTYVQ YSGEQPLPTQ VSSLPGNNLI FLNSVASTSS 60 FPQTSQHLVG IPLPPGSVTG DSNSQSMHHE MSPYHGFASR IHGNLWNPID PAADATGLES 120 TTPRSQQGLS LSLSSQQQRQ PPLPNYGAFR SSERDQVAAA SRPQASAVVS AEDIRLSPGG 180 LSPAASGVTI GVSGMPSAVL SSKYLKAAQE LLDEVVNVGH GIMHKKDKSK KDGEEKKMSG 240 ELTARPKTGD GSASGEGTSR KSGAELTAVE RQEVQMKKAK LMTMLDEVEQ RYRQYHHHMQ 300 VVVASFEQAL GVGSARSYTS LALKTISKQF RCLRDAIAGQ VKAASQSLGE EESSPQGKLQ 360 GTSRLKFVDH HFRQQQALQQ LGMVPHNSNA WRPQRGLPER AVSVLRAWLF EHFLHPYPKD 420 SDKQTLAKQT GLTRSQVSNW FINARVRLWK PMVEEMYLEE TKENEKNESG DKPGKTGHKN 480 NEDSTSKSCP PQNRTPSLST SANSTSPMGG NLGTNTGFSL IGSSELEGIA QVGNKKLRSS 540 QLLQAQAIEV DNKPRDLTNN EPEQLPLAMG FNDERQSRHN YPMLRGPANF IGGFEQYPIE 600 DIGRFGAEQF TAPRFPGNGV SLTLGLPHCE NLSIPGNHHH QNFLHGQSIQ LGRRLEMGDE 660 QHELSGLSSS GPNSSTAFEG MNIQNNRKRF AAQLMPDFVA

Sequence ? help Back to Top

Protein Sequence Length: 700 aa Download sequence

MAAYFQHNSE SQAGDGLQTL VLMNPPTYVQ YSGEQPLPTQ VSSLPGNNLI FLNSVASTSS  60
FPQTSQHLVG IPLPPGSVTG DSNSQSMHHE MSPYHGFASR IHGNLWNPID PAADATGLES  120
TTPRSQQGLS LSLSSQQQRQ PPLPNYGAFR SSERDQVAAA SRPQASAVVS AEDIRLSPGG  180
LSPAASGVTI GVSGMPSAVL SSKYLKAAQE LLDEVVNVGH GIMHKKDKSK KDGEEKKMSG  240
ELTARPKTGD GSASGEGTSR KSGAELTAVE RQEVQMKKAK LMTMLDEVEQ RYRQYHHHMQ  300
VVVASFEQAL GVGSARSYTS LALKTISKQF RCLRDAIAGQ VKAASQSLGE EESSPQGKLQ  360
GTSRLKFVDH HFRQQQALQQ LGMVPHNSNA WRPQRGLPER AVSVLRAWLF EHFLHPYPKD  420
SDKQTLAKQT GLTRSQVSNW FINARVRLWK PMVEEMYLEE TKENEKNESG DKPGKTGHKN  480
NEDSTSKSCP PQNRTPSLST SANSTSPMGG NLGTNTGFSL IGSSELEGIA QVGNKKLRSS  540
QLLQAQAIEV DNKPRDLTNN EPEQLPLAMG FNDERQSRHN YPMLRGPANF IGGFEQYPIE  600
DIGRFGAEQF TAPRFPGNGV SLTLGLPHCE NLSIPGNHHH QNFLHGQSIQ LGRRLEMGDE  660
QHELSGLSSS GPNSSTAFEG MNIQNNRKRF AAQLMPDFVA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G35940.1	1e-150	TALE family protein