PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM79070.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family NAC
Protein Properties Length: 261aa    MW: 29171.6 Da    PI: 5.4376
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM79070.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM132.53.1e-4151383127
         NAM   3 pGfrFhPtdeelvveyLkkkvegkk.....leleevikevdiykvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 
                 pGfrF Pt+eelv +yL++k+++++       +++v++ +diy+++Pw+Lp+     ++++ ++w+fF++r++++a+g r++r t+sgyWkatg+   v
  OWM79070.1   5 PGFRFFPTEEELVLFYLHNKLNRRSrpdleSLIDRVVPLLDIYEFNPWELPQfagePCQGDPEQWFFFIPRQESEARGGRPKRLTASGYWKATGSPGLV 103
                 9********************9999655432233468888***********645654455777************************************ PP

         NAM  93 lskkgelvglkktLvfykgrapkgektdWvmheyr 127
                 +s++++ +g+k+t+vfy+grap g+kt+W m+ey+
  OWM79070.1 104 YSSGNRIIGVKRTMVFYSGRAPAGRKTEWKMNEYK 138
                 **********************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 261 aa     Download sequence    
MNDLPGFRFF PTEEELVLFY LHNKLNRRSR PDLESLIDRV VPLLDIYEFN PWELPQFAGE  60
PCQGDPEQWF FFIPRQESEA RGGRPKRLTA SGYWKATGSP GLVYSSGNRI IGVKRTMVFY  120
SGRAPAGRKT EWKMNEYKAI EGEASSSSGA IPKLRQEYSL CRVYKQSKCV RAFDRRPLLA  180
VGSTAQQQEQ LHGSVEAVAS SSSQNSPGQE RISGSPGNAS SCDDGDPPVP SGGTVDGADD  240
LMNMEWLDQD QLTINWFHGI Q
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G22380.19e-73NAC family protein