PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM79114.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family ERF
Protein Properties Length: 236aa    MW: 26134.1 Da    PI: 6.6814
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM79114.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP247.83.5e-1558107155
         AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 + y+GVr  +++g+Wv+e rdp    k+ r++lg+f  +++Aa+a++ a+++l+g
  OWM79114.1  58 PVYRGVR--ERNGKWVCEMRDPH---KKSRIWLGTFTCPDMAARAYDVAALALKG 107
                 68****6..679*********62...25***********************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 236 aa     Download sequence    
MKSRTANSPS SSSSSSSSSK DFQIKNSQHD IGNLSDYSGI DSRKRKSGRK KFHETRHPVY  60
RGVRERNGKW VCEMRDPHKK SRIWLGTFTC PDMAARAYDV AALALKGDSA NLNFPQPSVP  120
SPNLFKPRDM YSTHGALVEA PVSGDDDPVR ILPSPSSSSP SLSSFSTLNI DGEIMSGERV  180
QQKSARAYYD EEEIFNMPGL IVSLAEGLMI SPPGMDYGFS WPDDQADIEY LSLWSD
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
14247SRKRKS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25470.15e-31ERF family protein