PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM79225.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family ERF
Protein Properties Length: 243aa    MW: 26939.1 Da    PI: 4.8363
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM79225.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.45e-2095144255
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                 +y+GVr+++ +g+W+AeIrdp+    r  r++lg+f taeeAa+a+++a+ +++g
  OWM79225.1  95 QYRGVRQRP-WGKWAAEIRDPR----RaVRVWLGTFVTAEEAARAYDKAAIEFRG 144
                 6********.**********82....48************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 243 aa     Download sequence    
MFSGQPLPAR LAQDQYDELS VIFSACTDTA RLQEYYFPPL QSVPAAVTVP SLICESCRIE  60
GCLGCEFFPQ HIPAAEAEEE GTGSKKRKRR QRKNQYRGVR QRPWGKWAAE IRDPRRAVRV  120
WLGTFVTAEE AARAYDKAAI EFRGARAKLN FPNTEYYSLK PRSDVDETRS SSAGEDNGVE  180
VSKPVSSGED NGVEVLKPTN MMEKSGAGLG EQGVGDFWGI FGGGGDDDGD QELKQLMMLL  240
WSD
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
18590KKRKRR
28593KKRKRRQRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G34410.12e-29ERF family protein