PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM79231.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

Protein Properties

Length: 413aa MW: 47081.5 Da PI: 6.3688

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM79231.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	58.4	1.3e-18	62	151	1	98
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 f+k++++s+v + +l lp f+++h+ + t++lede+g+++ev +i++k+ l++GWk F a +L egD+v+F+l++ +f +v ++r OWM79231.1 62 FLKTMVRSNVATGFWLHLPMGFCKAHMPR--HNSTVILEDENGEKYEVHYIMDKTA----LSAGWKLFTTARKLVEGDVVIFQLVEPCRF--KVYIVR 151 89**********************744..4559***********888887....*********************9987888..787776 PP

Sequence ? help Back to Top
Protein Sequence Length: 413 aa Download sequence
MKADAVTFMF GFDLISFRES FRQKRLMVDD LYHYDHVGVK SSTMERAEEF TRSLTPPGLQ 60 TFLKTMVRSN VATGFWLHLP MGFCKAHMPR HNSTVILEDE NGEKYEVHYI MDKTALSAGW 120 KLFTTARKLV EGDVVIFQLV EPCRFKVYIV RADEKSVADG MPELDASAGQ IAPANDAKRK 180 VVQHRVRRRK SKPSRNRSLV VAETQITSAQ DNESKEVSED PSLVTNEGTR ILANCSPDFE 240 EAKSTGNFTI LVNSTAIDSE LSETQRTKYY ELCMTQNSYL HGNLLKSISP KLAAEIISET 300 VNIAGLIRAC DISTSEEEYS VWDKTLEGFE MLGMRVGFLR TRLGRLRELA SEFQKYKNVE 360 TQREIAEQEL RAIREELSQL KELRSRLDSE IEALKASVER HEHIFQQEAS AAW

Sequence ? help Back to Top

Protein Sequence Length: 413 aa Download sequence

MKADAVTFMF GFDLISFRES FRQKRLMVDD LYHYDHVGVK SSTMERAEEF TRSLTPPGLQ  60
TFLKTMVRSN VATGFWLHLP MGFCKAHMPR HNSTVILEDE NGEKYEVHYI MDKTALSAGW  120
KLFTTARKLV EGDVVIFQLV EPCRFKVYIV RADEKSVADG MPELDASAGQ IAPANDAKRK  180
VVQHRVRRRK SKPSRNRSLV VAETQITSAQ DNESKEVSED PSLVTNEGTR ILANCSPDFE  240
EAKSTGNFTI LVNSTAIDSE LSETQRTKYY ELCMTQNSYL HGNLLKSISP KLAAEIISET  300
VNIAGLIRAC DISTSEEEYS VWDKTLEGFE MLGMRVGFLR TRLGRLRELA SEFQKYKNVE  360
TQREIAEQEL RAIREELSQL KELRSRLDSE IEALKASVER HEHIFQQEAS AAW

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	187	192	RRRKSK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G42700.1	6e-28	B3 family protein