PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM79429.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family ERF
Protein Properties Length: 242aa    MW: 26516.6 Da    PI: 8.4117
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM79429.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.32.1e-19110160255
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 +++GVr+++ +g+++AeIrdp  ng  +r++lg++ taeeAa a+++a+ +++g
  OWM79429.1 110 HFRGVRQRP-WGKFAAEIRDPARNG--TRVWLGTYETAEEAALAYDRAAFRMRG 160
                 69*******.**********97676..*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 242 aa     Download sequence    
MISSFTALFP CLTDTWGDLP LQVDDPDDML IYNSLHDAVS SGWSPLMTST THSDYSSSAP  60
WPVDPTYYYN EYSTTDERLI VEEIGRRSPA VPGKRSPGGN SSSSASRGRH FRGVRQRPWG  120
KFAAEIRDPA RNGTRVWLGT YETAEEAALA YDRAAFRMRG SKALLNFPHR INSGEPAPVR  180
VTASKRKEQE PSSGSSSSGS APKKKNKKFA APESTVKEAE EAGFIMLQAV AQLPLGEQLL  240
VS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17500.11e-40ERF family protein