PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM79505.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family ERF
Protein Properties Length: 232aa    MW: 25503.3 Da    PI: 4.767
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM79505.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.66.3e-1858108155
         AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 + y+GVr++  +g+Wv+e+r+p   +k++r++lg+f  ae+Aa+a++ a+++l+g
  OWM79505.1  58 PVYRGVRRRD-SGKWVCEVREP---NKKTRIWLGTFQNAEMAARAHDVAALALKG 108
                 68*****999.7******9998...347************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 232 aa     Download sequence    
MDVFSSLSDP NSYGSPLSDG GSSRPRNFSD DNEAEVLLAS ENPKKRAGRK KFREMRHPVY  60
RGVRRRDSGK WVCEVREPNK KTRIWLGTFQ NAEMAARAHD VAALALKGRR SACINFADSA  120
WRLPVPDSAD PKDIRKAAAD AAEAFRPMEA SDGALSSEEM GNETKEVVSS VVEERSSISD  180
MDEKASAFSM PELLADMAAE GLLPPLQSNG DGYMEDEEGD INAYVSLWSH SI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25480.11e-48ERF family protein