PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM79507.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family ERF
Protein Properties Length: 224aa    MW: 23699.4 Da    PI: 5.5638
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM79507.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP250.17.1e-1652100255
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                  y+GVr  +++g+Wv+eIr+p++   ++r++lg++ t+++Aa a++ a+++l+g
  OWM79507.1  52 NYRGVR--SRSGKWVSEIREPRK---TTRIWLGTYPTPDMAAVAYDVAALALKG 100
                 69***6..668*********843...5************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 224 aa     Download sequence    
MDHHHHQPPP PSPDPPSLLP PPSLATPTTR PDPVSPRLVP SPDGSSGKHH PNYRGVRSRS  60
GKWVSEIREP RKTTRIWLGT YPTPDMAAVA YDVAALALKG PEATVNFPEL VHAYPVPAST  120
SAADIRAAAG RAAAAREPKP ELKQNQPVQS QPEGDAGASS GSTMTATSSA AAEQEFIDEE  180
AILDMPNLLV DMAKGMLVSP PRMKSASPDD SPEDSDGGGL WSYP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52020.11e-36ERF family protein