PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM79658.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family Dof
Protein Properties Length: 282aa    MW: 30383.2 Da    PI: 7.0147
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM79658.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof124.53.5e-393596263
      zf-Dof  2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkksss 63
                ke++l+cprC+stntkfCyynnyslsqPryfCk+CrryWt+GG+lrnvPvGgg+rknk++ss
  OWM79658.1 35 KEANLNCPRCNSTNTKFCYYNNYSLSQPRYFCKTCRRYWTQGGSLRNVPVGGGSRKNKRTSS 96
                67889*****************************************************9875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 282 aa     Download sequence    
MLELESLSSV PSSSREALEE RAIRAQKGQQ QQLQKEANLN CPRCNSTNTK FCYYNNYSLS  60
QPRYFCKTCR RYWTQGGSLR NVPVGGGSRK NKRTSSSSPS SSKKNIMMIT NNHPNNLSTP  120
PISGLIQSDP QNPSSVQGHD LNLAYDGNLP MLPQNPSFIT SSELTLGNFM ALTVPPPGSA  180
DPIGNVYSSG GLFSSLPELK PTLHYFSLGS DNNNGFGSGI AGNNNGESAP ESANARSGDD  240
DGDGLIYDQR DHNSRGQEDH SSSGYNWNNS GMFGGGGGSW QL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G55370.12e-29Dof family protein