PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM79757.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family GRAS
Protein Properties Length: 510aa    MW: 57353.2 Da    PI: 6.4595
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM79757.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS452.33.1e-1381395101374
        GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaN 99 
                 l+++L++ A+avs++dl+ aq+l+ +l+ ++s +g+p+qRl ay++e+L arla+s+s++ykal+ +e +   s+e l+++++++ev+P++kf+++ aN
  OWM79757.1 139 LKQVLIDSAKAVSEDDLSTAQRLMGKLRGMVSVSGEPIQRLGAYMLEGLVARLASSGSSIYKALRGKEPE---STELLSYMHILYEVCPYFKFGYMSAN 234
                 5799*****************************************************************9...9************************* PP

        GRAS 100 qaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledleleeLrv 196
                  aI ea++ e+ vHi+Df+i+qG QW++L+qa+a+Rp+g+p++RiTg+++++s   +   le +g+rL+++Ae++gvpfef++++a +  d+e+++L +
  OWM79757.1 235 GAIAEAMKDEKLVHIVDFQIGQGSQWITLIQAFAARPGGAPHIRITGLDDSTSAyaRGGGLEIVGKRLSRLAESFGVPFEFHAVTAVSGRDVEPKNLCL 333
                 **************************************************998899999*************************999************ PP

        GRAS 197 kpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreiv 295
                 +p+EalaVn+++ lh+++desvs+ ++rd++L++vk+lsPkvv++veqe+++n+++F+ rf+e+l+yy+a+f+s++++lpre++eri+vE+++l+r++v
  OWM79757.1 334 RPNEALAVNFAFVLHHMPDESVSTLNHRDRLLRMVKGLSPKVVTLVEQESNTNTAPFFPRFVETLNYYTAMFESIDVTLPREHKERINVEQHCLARDVV 432
                 *************************************************************************************************** PP

        GRAS 296 nvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                 n++acegaer+erhe l+kWr+r+++aGF+p+pls+ +++ +k+ll++++ + yr+ee+ g+l+lgW+dr Lv+ SaW+
  OWM79757.1 433 NIIACEGAERVERHELLGKWRSRFSMAGFSPYPLSSLVNSAIKTLLENYSYK-YRLEERGGALYLGWMDRDLVASSAWK 510
                 **************************************************77.*************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 510 aa     Download sequence    
MPKRAYCQVK QEVDPYLPQF HALDRLGTHF YTQNYLKKFC TLDSSSASSN PILTQDCLFQ  60
RYDHQSSPED HTRASSISGS CLTDESDDFK HKLRELETVM LGPDDPDIFY SNNDSKRESD  120
LSLPWRILMD PISISFGDLK QVLIDSAKAV SEDDLSTAQR LMGKLRGMVS VSGEPIQRLG  180
AYMLEGLVAR LASSGSSIYK ALRGKEPEST ELLSYMHILY EVCPYFKFGY MSANGAIAEA  240
MKDEKLVHIV DFQIGQGSQW ITLIQAFAAR PGGAPHIRIT GLDDSTSAYA RGGGLEIVGK  300
RLSRLAESFG VPFEFHAVTA VSGRDVEPKN LCLRPNEALA VNFAFVLHHM PDESVSTLNH  360
RDRLLRMVKG LSPKVVTLVE QESNTNTAPF FPRFVETLNY YTAMFESIDV TLPREHKERI  420
NVEQHCLARD VVNIIACEGA ERVERHELLG KWRSRFSMAG FSPYPLSSLV NSAIKTLLEN  480
YSYKYRLEER GGALYLGWMD RDLVASSAWK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G48150.10.0GRAS family protein