PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM79833.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family MYB_related
Protein Properties Length: 77aa    MW: 8800.45 Da    PI: 4.0746
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM79833.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding29.91.3e-092971145
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45
                     ++ ++++E+ l+ +  k+ G + W++Ia +++ gR+++++  +w 
       OWM79833.1 29 KLEFSEDEETLINRMYKLVGER-WSLIAGRIP-GRSAEEIEKYWT 71
                     678*****************99.*********.***********5 PP
Sequence ? help Back to Top
Protein Sequence    Length: 77 aa     Download sequence    
MADDLETMDH SSDDSSSVDS SEDASRDSKL EFSEDEETLI NRMYKLVGER WSLIAGRIPG  60
RSAEEIEKYW TSRYTSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46410.12e-18MYB_related family protein