PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM79903.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family MYB_related
Protein Properties Length: 176aa    MW: 20110.4 Da    PI: 9.9911
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM79903.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding52.51.1e-162772148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     rg+ T +E++l+++++k+lG++ W++Ia +++ gRt++++k++w+++l
       OWM79903.1 27 RGNITDQEEDLILRLHKLLGNR-WSLIAGRLP-GRTDNEIKNYWNSHL 72
                     7999******************.*********.************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 176 aa     Download sequence    
MAQRGFNRCG KSCRLRWLNY LRPNIKRGNI TDQEEDLILR LHKLLGNRWS LIAGRLPGRT  60
DNEIKNYWNS HLSKKINPKQ KPGPAPRKGT SIVEKAPQLA DSNKANMYHI QAIKDRSTAT  120
DGTTTSEGEH SSSKQSTPSF DINGADDDFF DFSNESPLNL EWVSRFLEFD SRHHQS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G40330.12e-42MYB family protein