PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM80199.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

Dof

Protein Properties

Length: 171aa MW: 18977.6 Da PI: 9.3229

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM80199.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	122	2.1e-38	41	99	2	60
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkk 60 ++k+++cprC+s++tkfCy+nny+++qPr+fC++C+ryWt+GGalrnvPvG+grrknk OWM80199.1 41 PDKIIPCPRCKSMETKFCYFNNYNVNQPRHFCRGCQRYWTAGGALRNVPVGAGRRKNKP 99 68999****************************************************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 171 aa Download sequence
MESPTPGIKL FGTTITLQDK KTNNGSPEKS DQEIAAELKR PDKIIPCPRC KSMETKFCYF 60 NNYNVNQPRH FCRGCQRYWT AGGALRNVPV GAGRRKNKPP CRPGLPGFAE NISARLYEAS 120 EVQQYFDLEG VVAAAAAAET WHLMSAQGSF QQVLPAVKRQ RSAMIGDHQS C

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G29160.1	6e-51	Dof family protein