PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM80500.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

Nin-like

Protein Properties

Length: 884aa MW: 99158.5 Da PI: 5.9339

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM80500.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	90.8	1e-28	582	632	2	52
RWP-RK 2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 ek+isl+ l++yF++++kdAAk+Lgvc+T+LKriCRq+GI RWP+Rkik++ OWM80500.1 582 EKTISLQLLRQYFAGSLKDAAKSLGVCPTTLKRICRQHGITRWPSRKIKKV 632 799**********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 884 aa Download sequence
MEDGPFNTNV SGLSDLTMDL DLMDELLLEG CWLETTDAFD LLKWGSPAPD TLNYSLDNLP 60 SQEINERLVS YSSSFQQTIQ EDESKRDLSE NLNIGGVDET QAEGEGSEVG RRWWIAPSVS 120 SGPYSVKQRL MQAIRYLNEC TKDKDVLIQL WVPVKSGDRN VLTTTDQPYT LDSNSESLQN 180 YRSVSEAYQF PADEDAKEYI GMPGRVFLGK LPEWTPDVRF FRTEEYPRVS YALQCDVRGS 240 LALPVFERGS GTCLGVVEIV STSQKINYEP ELENVCRALE AVDLRSSPSF SSPSVKACNQ 300 FYQAALPQIR EHLTSICKAY RLPLALTWAS CIQQGKEGRR HSSENYNLCV STVDFACFVA 360 DERYSGFHKA CSEHHLLRGQ GIVGRAFMTN RSCFAADVTA FSRKEYPLSH HARMFELQCA 420 VATPLMITSR DSPDFVLEFF LPKDCKDEDE QNRVSTSLSS FVLRAFENSQ IVSSARDENC 480 KKEETKKVPS FVSREGSEEK GLWISNMMDA QQKGKGVGVS LDYHKKPKEE FKVTNEWEET 540 QVEVHHNFES KPGSEAGDDN SIGVSDLVGG RKLVQTRRAR TEKTISLQLL RQYFAGSLKD 600 AAKSLGVCPT TLKRICRQHG ITRWPSRKIK KVGHSLRKLQ LVMDSVQGAE GTIPIGSFYK 660 SFPELKCSTN EGLKQSNQPE NLCESTGLKS SPSSSCSQSS SSTTSCSSGT KQELTGTNTR 720 SCGDSVMLED PTGILKRVRS DAELHVSTQE EPKLLKRSQS QKTLDENLSL KRLPPLLNSN 780 GPNSRGGSIY RVKAMFGDEK IRFSLQPKWG FRDLQLEVAK RFGIHDVSGI DLKYLDDDHE 840 WVLLTCDADL EECVDVYKMS QVRTIRIALH RVDQSNIRYS FGSI

Sequence ? help Back to Top

Protein Sequence Length: 884 aa Download sequence

MEDGPFNTNV SGLSDLTMDL DLMDELLLEG CWLETTDAFD LLKWGSPAPD TLNYSLDNLP  60
SQEINERLVS YSSSFQQTIQ EDESKRDLSE NLNIGGVDET QAEGEGSEVG RRWWIAPSVS  120
SGPYSVKQRL MQAIRYLNEC TKDKDVLIQL WVPVKSGDRN VLTTTDQPYT LDSNSESLQN  180
YRSVSEAYQF PADEDAKEYI GMPGRVFLGK LPEWTPDVRF FRTEEYPRVS YALQCDVRGS  240
LALPVFERGS GTCLGVVEIV STSQKINYEP ELENVCRALE AVDLRSSPSF SSPSVKACNQ  300
FYQAALPQIR EHLTSICKAY RLPLALTWAS CIQQGKEGRR HSSENYNLCV STVDFACFVA  360
DERYSGFHKA CSEHHLLRGQ GIVGRAFMTN RSCFAADVTA FSRKEYPLSH HARMFELQCA  420
VATPLMITSR DSPDFVLEFF LPKDCKDEDE QNRVSTSLSS FVLRAFENSQ IVSSARDENC  480
KKEETKKVPS FVSREGSEEK GLWISNMMDA QQKGKGVGVS LDYHKKPKEE FKVTNEWEET  540
QVEVHHNFES KPGSEAGDDN SIGVSDLVGG RKLVQTRRAR TEKTISLQLL RQYFAGSLKD  600
AAKSLGVCPT TLKRICRQHG ITRWPSRKIK KVGHSLRKLQ LVMDSVQGAE GTIPIGSFYK  660
SFPELKCSTN EGLKQSNQPE NLCESTGLKS SPSSSCSQSS SSTTSCSSGT KQELTGTNTR  720
SCGDSVMLED PTGILKRVRS DAELHVSTQE EPKLLKRSQS QKTLDENLSL KRLPPLLNSN  780
GPNSRGGSIY RVKAMFGDEK IRFSLQPKWG FRDLQLEVAK RFGIHDVSGI DLKYLDDDHE  840
WVLLTCDADL EECVDVYKMS QVRTIRIALH RVDQSNIRYS FGSI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35270.1	0.0	Nin-like family protein